如何解决在python中读取* .mhd / *。raw格式？

最简单的方法是使用SimpleITK（MedPy也将ITK用于.mhd / .raw文件）。命令

pip install SimpleITK

适用于许多python版本。要读取.mhd / .raw，可以从kaggle使用此代码

import SimpleITK as sitk
import numpy as np
'''
This funciton reads a '.mhd' file using SimpleITK and return the image array, origin and spacing of the image.
'''

def load_itk(filename):
    # Reads the image using SimpleITK
    itkimage = sitk.ReadImage(filename)

    # Convert the image to a  numpy array first and then shuffle the dimensions to get axis in the order z,y,x
    ct_scan = sitk.GetArrayFromImage(itkimage)

    # Read the origin of the ct_scan, will be used to convert the coordinates from world to voxel and vice versa.
    origin = np.array(list(reversed(itkimage.Getorigin())))

    # Read the spacing along each dimension
    spacing = np.array(list(reversed(itkimage.GetSpacing())))

    return ct_scan, origin, spacing

解决方法

谁能告诉我如何读取包含python中的 .mhd / .raw文件的数据集的方式？